Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857144.1_cds_XP_016513349.1_25914
CDS Infomation

[gene=LOC107830341] [db_xref=GeneID:107830341] [protein=lysM domain receptor-like kinase 3] [protein_id=XP_016513349.1] [location=join(93152..93934,94808..94866,100774..101354,101629..101844,101934..102073,102161..102250,102499..102604,102803..102954,103092..103189,103300..103438,103690..103788,103893..104057)] [gbkey=CDS]
Sequence

ATGTGTGTGGATTTCACAGACCTAAACAAGGCCTTCCCGAAAGACTCCTTTTCGTTGCCT
CATATCGATCAGCTCATTGACGCAACAGCAAGGCATGAGTTGTTAAGCTTCTTGGACGCC
TACTTTGGGTACAACCAAATCCTCATAGAGGAGGAGGACTTGGAAAAGGCTACTTTAATC
ACCCACCAGGGAACATACTGTTACAGAGTCATTTCATTCGTGTTGAAGAATGTAGGGGTG
ACCTATCAAAGGTTAGTCACCAAGATGTTCAAGGACCAACTCGGAAAAACAATGGAAGTT
TATATAGACGACATATTGGTAAAATCAATAAGGAAGGAGGACCATATCGACCAGCTGAGA
GAGGCCTTCGGTATACTAAGGCAATACGGCATGAAGCTAAACCCCGGAAAATGCGCCTTC
GGCGTAACTTCGGGCAAGTTCCTCGGCTTCCTGATATCACAAAGAGGCATTGAGGTCAAC
CCCAACCAAATCAAAGCAATTGAGGGAATACCTAAAGTATTAACCATGAAGAATAATGTG
CAAAAACTGACAGGCCGTATAGCCGCCTTATCGAGGTTCATCTCAAGATCCTTCGATAGG
TGCCACAAATTCTTCAACGTGCTAAAAAAGAACAACGATCTCCAGTGGAATTCAGAATGC
ATCGGGGCCTTAAGAGAACTAACGACATATTTTCCCTTGCCCCCACTACTAGCCAAAGTA
GAACCCGACAAACGCCTCATGATATACTTGGCCATGTCAGAGGTCGCAGTAAGTGCAGTA
CTGGAGAGAGTACTCCCATCAGACAAAATAGAAGCCAAAAAGCTTCGAATGCAGGCGGTC
AGAAATTTGGCTTCTGGTGCACCTACACAGTTAACTAATATCTACCCTTTTCCATGCTCG
GATCACATCAAGACGTGCAGCGCGTTCCTCTATCAGCATAATGGCCTGTCAAAACAGAAT
ATCACCAAGTTTTACTCAGTTAATGTATCAGCAATTAAGCCGATTAGCTACGATGACAGA
CAAGACTACCTAGTAACTGTACCTTGTACTTGTAAAGATGTTAATGGAACTGTTGGATAT
TTCTATGACACAAGTTATAAGCTGCAGCTACTGGATACATTTGCAAATGTTTCTAATGAT
ATTTATAGTGGCCAGGCTTGGAAAGTTGGTGGAGAAGAAGAAAGTTACAAAGCTGAGGAT
GTAGTAACTATGCATCTATTGTGTGGATGTGTAGAAGATGACCAGAAAACTGTAGTGACA
TATACTGTTCAGCAGCGCGATACGCTATCAAGTATTGGAGATTTACTTACTTCTCAAGTT
AGTGACATTGAGAAGTTGAATCCTTCCTTGGCAAGTCCACAATTTGTAGATATTGGATGG
CTTTTATATGTGCCCATGTACAAAAATGGAGTTCCTCTACCAACAGGAAAGAAGCACAAG
GCGCACAAATGGACGATACTAGTTGGAATATTATCAGCTGTGACAGTACTTTCAATGTGT
ACTGTTATGATATTTATTATCAGGAGAAACAGATTGCAAAAACGCGCCAAGGAAGATCGT
GCAGCTATTTATAAAAGCTTAAGTACTAACAAAACCATGTCTTTGCAGAAGCAGTACATG
TACAAAGATCAAACTGAAGACATTCCAGTTTTTGAATCTGAAAGGCCAGTAATATACAGT
CTTGAAGAAATTGCAGAAGCTACGTGTGATTTTGACGAGTCTAGGATAATTGGACAAGGT
GGATATGGGAGTGTATACTATGGGACAATTGGGAAGCAGGAAGTTGCAATAAAAAAGATG
AGGTCTAACAAGTCCAAGGAGTTTATTGCAGAGCTCAAAGTCTTATGCAAGATCCACCAC
ATAAATGTGGTGGAGTTGTTGGGTTATGCCAGTGGGGATGATCACCTCTACTTGGTTTAT
GAGTATATCCCAAATGGTTCTCTCAATGAACATCTTCATCAACCAATGCTAAAAGGTCAT
AAGCCTCTAAGTTGGACTACAAGAACACAGATAGCTGTAGATACTGCAAGGGGTATTGAG
TATATCCATGACCATACAAAATCTCGGTATGTTCATCGTGATATAAAAACGAGCAACATT
CTACTTGACGAAGCCATGAGAGCTAAGGTTGCAGATTTTGGTCTGGCGAAACTAGTTGGT
CGAACCAATGAAGATGAATTCTTAGTGACTCGCCTAGTTGGAACACCAGGATATCTTCCC
CCTGAATCTGTGAAAGAGCTGCAGATAACTACCAAAACAGATGTTTTTGCATTTGGAGTA
GTTCTTGCAGAACTAATAACTGGCAAACGGGCACTCATTCGCGAAAATGGAGATCCTAAC
AAGATGAAATCACTCATCTCAATTATTCAAGAAATATTCCAAGATGAGGATCCAGAGTCA
GCATTGGAATCCTTTATAGATGGAAATATAAAGGGATGCTATCCCTTGGAAGATGTATAC
AAGATGGGAGAAATTGCAGATTGGTGCCTAAGTGAAAATGCAATTAACAGACCAGAAATG
CGTGAGGTGGTTGTTGCATTATCTCAAATCAGGATCTCCTCCACAGAATGGGAGGCATCA
TTAGGAGGAGACAGTGTGGTTTTTAGCGGACTCTTTAACGGGAGATGA

Peptide Sequence

PEP ID

XP_016513349.1
PEP Infomation

PREDICTED: lysM domain receptor-like kinase 3 [Nicotiana tabacum]
Sequence

MCVDFTDLNKAFPKDSFSLPHIDQLIDATARHELLSFLDAYFGYNQILIEEEDLEKATLI
THQGTYCYRVISFVLKNVGVTYQRLVTKMFKDQLGKTMEVYIDDILVKSIRKEDHIDQLR
EAFGILRQYGMKLNPGKCAFGVTSGKFLGFLISQRGIEVNPNQIKAIEGIPKVLTMKNNV
QKLTGRIAALSRFISRSFDRCHKFFNVLKKNNDLQWNSECIGALRELTTYFPLPPLLAKV
EPDKRLMIYLAMSEVAVSAVLERVLPSDKIEAKKLRMQAVRNLASGAPTQLTNIYPFPCS
DHIKTCSAFLYQHNGLSKQNITKFYSVNVSAIKPISYDDRQDYLVTVPCTCKDVNGTVGY
FYDTSYKLQLLDTFANVSNDIYSGQAWKVGGEEESYKAEDVVTMHLLCGCVEDDQKTVVT
YTVQQRDTLSSIGDLLTSQVSDIEKLNPSLASPQFVDIGWLLYVPMYKNGVPLPTGKKHK
AHKWTILVGILSAVTVLSMCTVMIFIIRRNRLQKRAKEDRAAIYKSLSTNKTMSLQKQYM
YKDQTEDIPVFESERPVIYSLEEIAEATCDFDESRIIGQGGYGSVYYGTIGKQEVAIKKM
RSNKSKEFIAELKVLCKIHHINVVELLGYASGDDHLYLVYEYIPNGSLNEHLHQPMLKGH
KPLSWTTRTQIAVDTARGIEYIHDHTKSRYVHRDIKTSNILLDEAMRAKVADFGLAKLVG
RTNEDEFLVTRLVGTPGYLPPESVKELQITTKTDVFAFGVVLAELITGKRALIRENGDPN
KMKSLISIIQEIFQDEDPESALESFIDGNIKGCYPLEDVYKMGEIADWCLSENAINRPEM
REVVVALSQIRISSTEWEASLGGDSVVFSGLFNGR

Transcript Sequence

Gene sequence data has not been registered.